I am trying to return my bike to the stock part but having trouble finding one. Can anyone tell me if the assembly that is for a 99 V 650 Classic is the smae as a 05 V 1100 Classic. Found that one on e-bay

I doubt that they're the same but with some minor modifications you should be able to make it fit and make it look good. Check with your dealer's parts dept, if they're willing to help they should be able to give you some info.